Yuchi Zheng, Junhua Hu, Xiaomao Zeng. 2018. Examining the interglacial high-elevation refugia scenario in East Asian subtropical mountain systems with the frog species Leptobrachium liui. Ecology and Evolution 8: 9326–9340.

　　Yuchi Zheng, John J. Wiens. 2016. Combining phylogenomic and supermatrix approaches, and a time-calibrated phylogeny for squamate reptiles (lizards and snakes) based on 52 genes and 4162 species. Molecular Phylogenetics and Evolution 94: 537–547.

　　Yuchi Zheng, John J. Wiens. 2015. Do missing data influence the accuracy of divergence-time estimation with BEAST? Molecular Phylogenetics and Evolution 85: 41–49.

　　Yuchi Zheng, Rui Peng, Robert W. Murphy, Masaki Kuro-o, Lujun Hu, Xiaomao Zeng. 2012. Matrilineal genealogy of Hynobius (Caudata: Hynobiidae) and a temporal perspective on varying levels of diversity among lineages of salamanders on the Japanese Islands. Asian Herpetological Research 3: 288–302. 

　　Yuchi Zheng, Dingqi Rao, Robert W. Murphy, Xiaomao Zeng. 2011. Reproductive behavior and underwater calls in the Emei mustache toad, Leptobrachium boringii. Asian Herpetological Research 2: 199–215. 

　　Yuchi Zheng, Rui Peng, Masaki Kuro-o, Xiaomao Zeng. 2011. Exploring patterns and extent of bias in estimating divergence time from mitochondrial DNA sequence data in a particular lineage: a case study of salamanders (Order Caudata). Molecular Biology and Evolution 28: 2521–2535. 

　　Yuchi Zheng, Duncan Deng, Shuqiang Li, Jinzhong Fu. 2010. Aspects of the breeding biology of the Omei mustache toad (Leptobrachium boringii): polygamy and paternal care. Amphibia-Reptilia 31: 183–194. 

　　Yuchi Zheng, Jinzhong Fu, Shuqiang Li. 2009. Toward understanding the distribution of Laurasian frogs: a test of Savage’s biogeographical hypothesis using the genus Bombina. Molecular Phylogenetics and Evolution 52: 70–83. 

　　Yuchi Zheng, Shuqiang Li, Jinzhong Fu. 2008. A phylogenetic analysis of the frog genera Vibrissaphora and Leptobrachium, and the correlated evolution of nuptial spine and reversed sexual size dimorphism. Molecular Phylogenetics and Evolution 46: 695–707. 

　　Yuchi Zheng, Jinzhong Fu. 2007. Making a doughnut-shaped egg mass: oviposition behaviour of Vibrissaphora boringiae (Anura: Megophryidae). Amphibia-Reptilia 28: 309–311.